seqss
Classify.seqs Generating search database... takes forever - mothur ...
forum.mothur.org
May 5, 2020 ... Hi, I have used the reference file SILVA_132_LSURef_tax_silva_trunc.fasta (593 318 kb), and taxonomy file taxmap_slv_lsu_ref_132.txt (27 175 ...
Lazy Cartesian product of several Seqs in Scala - Stack Overflow
stackoverflow.com
Nov 30, 2011 ... You can define the cartesian product using existing operators on collections; if you convert collection to views, the construction will be lazy.
classify.seqs possible bug - mothur bugs - mothur
forum.mothur.org
Sep 12, 2011 ... It looks like mothur is giving you an error message about your template and taxonomy files not matching. “is in your template file and is not in ...
Track Seqs: I have more resulting reads than input reads · Issue ...
github.com
Mar 15, 2019 ... Hello, I am running dada2 v1.8. When I track my sequences, I end up having more final reads than input reads. My data consists of forward ...
representative seqs per sample - User Support - QIIME 2 Forum
forum.qiime2.org
Oct 18, 2019 ... The feature table is what maps the individual sequences to each sample. It sounds like what you probably want to do is use qiime feature-table ...
Erica Pico SEQS equivalent : r/modular
www.reddit.com
Sep 13, 2023 ... Erica Pico SEQS equivalent. Hi! Fairly simple question here, but couldn't find a solution. I'm looking for a basic switch module similar to ...
Mafft error for alignment of rep-seqs - User Support - QIIME 2 Forum
forum.qiime2.org
Apr 25, 2018 ... Hi. I am trying to align some sequences following the steps given in the “Moving pictures” tutorial to create a phylogenetic tree; ...
Black box with overlaping vdb seqs - USD Composer (Create ...
forums.developer.nvidia.com
May 12, 2023 ... See, I got this “box” appearing when my VDB assets are overlapping: How can I fix this? Pekka.
representative seqs in a taxonomy affiliation - User Support - QIIME ...
forum.qiime2.org
Jul 27, 2023 ... When you say the majority of your representative sequences appear as unclassified species, you mean they are not classified to the species level ...
translate.seqs
mothur.org
translate.seqs . commands. The translate.seqs command reads a fastafile containing dna and translates it to amino acids. Alternatively, you can provide an ...